Transcript_contig_54312 (54312)

Aliases : 54312

Description : Retinoblastoma-associated protein, A-box; Retinoblastoma-associated protein, B-box [Interproscan].

Gene families : OG_01_0004846 (OrthoFinder) Phylogenetic Tree(s): OG0004846_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Transcript_contig_54312
Cluster	HCCA: Cluster_241

Target	Alias	Description	ECC score	Gene Family Method	Actions
PTI_09G03370.1	No alias	Retinoblastoma-associated protein, B-box;...	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051726	regulation of cell cycle	IEA	Interproscan
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005777	peroxisome	IEP	Enrichment
BP	GO:0006996	organelle organization	IEP	Enrichment
BP	GO:0007031	peroxisome organization	IEP	Enrichment
MF	GO:0016791	phosphatase activity	IEP	Enrichment
CC	GO:0042579	microbody	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002719	RB_B	891	1022
IPR002720	RB_A	478	676

External Links

No external refs found!