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  5. Transcript_contig_54256

Transcript_contig_54256 (54256)


Aliases : 54256

Description : Sucrose-phosphatase-like, N-terminal; AMP-activated protein kinase, glycogen-binding domain [Interproscan].


Gene families : OG_01_0001937 (OrthoFinder) Phylogenetic Tree(s): OG0001937_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_54256
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
Dusal.0282s00014.1 33199296 AMP-activated protein kinase, glycogen-binding domain;... 0.02 OrthoFinder
Dusal.0610s00006.1 33191024 Sucrose-phosphatase-like, N-terminal [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR032640 AMPK1_CBM 200 282
IPR032640 AMPK1_CBM 117 191
IPR006380 SPP_N 446 716
No external refs found!