Transcript_contig_54242 (54242)


Aliases : 54242

Description : ChlI/MoxR, AAA lid domain; von Willebrand factor, type A; Magnesium chelatase ChlI domain [Interproscan].


Gene families : OG_01_0001370 (OrthoFinder) Phylogenetic Tree(s): OG0001370_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_54242
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001537.12 tig00001537_g9305.t1 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.02 OrthoFinder
Cre05.g242000 30783498, CHLD Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.03 OrthoFinder
Cz08g03270.t1 No alias von Willebrand factor, type A; Magnesium chelatase ChlI... 0.02 OrthoFinder
OT_05G05070.1 No alias ChlI/MoxR, AAA lid domain; von Willebrand factor, type... 0.02 OrthoFinder
PTI_02G06250.1 No alias ChlI/MoxR, AAA lid domain; von Willebrand factor, type... 0.02 OrthoFinder
Sro132_g062400.1 Contig2745.g22083 Chelatase subunit ChlD, chloroplastic 0.03 OrthoFinder
TP02G07880.1 No alias ChlI/MoxR, AAA lid domain; von Willebrand factor, type... 0.02 OrthoFinder
Vocar.0055s0003.1 32891609 Magnesium chelatase ChlI domain; ChlI/MoxR, AAA lid... 0.02 OrthoFinder
XM_002508787.1 MICPUN_62064, 62064 ChlI/MoxR, AAA lid domain; von Willebrand factor, type... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004655 porphobilinogen synthase activity IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008146 sulfotransferase activity IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0052646 alditol phosphate metabolic process IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
BP GO:1901136 carbohydrate derivative catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000523 Mg_chelatse_chII-like_cat_dom 200 270
IPR002035 VWF_A 563 668
IPR041628 ChlI/MoxR_AAA_lid 349 411
No external refs found!