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Aliases : 54224
Description : Amino acid transporter, transmembrane domain [Interproscan].
Gene families : OG_01_0001550 (OrthoFinder) Phylogenetic Tree(s): OG0001550_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Transcript_contig_54224 | |
| Cluster | HCCA: Cluster_238 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre02.g115300 | 30786182, AOT6 | Amino acid transporter AVT6E OS=Arabidopsis thaliana | 0.03 | OrthoFinder | |
| Cz06g02170.t1 | No alias | Amino acid transporter, transmembrane domain [Interproscan]. | 0.02 | OrthoFinder | |
| Dusal.0466s00007.1 | 33194845 | Amino acid transporter, transmembrane domain [Interproscan]. | 0.03 | OrthoFinder | |
| EOD26252 | No alias | Amino acid/polyamine transporter II, membrane protein [Ensembl]. | 0.01 | OrthoFinder | |
| Sro1611_g285900.1 | Contig2477.g20237 | Putative sodium-coupled neutral amino acid transporter 11 | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000145 | exocyst | IEP | Enrichment |
| BP | GO:0000724 | double-strand break repair via homologous recombination | IEP | Enrichment |
| BP | GO:0000725 | recombinational repair | IEP | Enrichment |
| MF | GO:0003690 | double-stranded DNA binding | IEP | Enrichment |
| MF | GO:0005216 | ion channel activity | IEP | Enrichment |
| MF | GO:0005230 | extracellular ligand-gated ion channel activity | IEP | Enrichment |
| BP | GO:0006259 | DNA metabolic process | IEP | Enrichment |
| BP | GO:0006281 | DNA repair | IEP | Enrichment |
| BP | GO:0006298 | mismatch repair | IEP | Enrichment |
| BP | GO:0006302 | double-strand break repair | IEP | Enrichment |
| BP | GO:0006310 | DNA recombination | IEP | Enrichment |
| BP | GO:0006887 | exocytosis | IEP | Enrichment |
| BP | GO:0006950 | response to stress | IEP | Enrichment |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Enrichment |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | Enrichment |
| MF | GO:0015267 | channel activity | IEP | Enrichment |
| MF | GO:0015276 | ligand-gated ion channel activity | IEP | Enrichment |
| MF | GO:0016410 | N-acyltransferase activity | IEP | Enrichment |
| MF | GO:0016746 | acyltransferase activity | IEP | Enrichment |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0022834 | ligand-gated channel activity | IEP | Enrichment |
| MF | GO:0022836 | gated channel activity | IEP | Enrichment |
| MF | GO:0030983 | mismatched DNA binding | IEP | Enrichment |
| BP | GO:0032940 | secretion by cell | IEP | Enrichment |
| BP | GO:0033554 | cellular response to stress | IEP | Enrichment |
| BP | GO:0046903 | secretion | IEP | Enrichment |
| BP | GO:0050896 | response to stimulus | IEP | Enrichment |
| BP | GO:0051716 | cellular response to stimulus | IEP | Enrichment |
| CC | GO:0099023 | vesicle tethering complex | IEP | Enrichment |
| BP | GO:0140352 | export from cell | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013057 | AA_transpt_TM | 4 | 261 |
| No external refs found! |