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  5. Transcript_contig_54220

Transcript_contig_54220 (54220)


Aliases : 54220

Description : Acetyl-CoA carboxylase, alpha subunit [Interproscan].


Gene families : OG_01_0001303 (OrthoFinder) Phylogenetic Tree(s): OG0001303_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_54220
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000241.77 tig00000241_g20939.t1 Lipid metabolism.glycerolipid... 0.02 OrthoFinder
Cre12.g519100 30792077 Lipid metabolism.fatty acid synthesis.acetyl-CoA... 0.02 OrthoFinder
PTI_22G01370.1 No alias Cytidyltransferase-like domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003989 acetyl-CoA carboxylase activity IEA Interproscan
BP GO:0006633 fatty acid biosynthetic process IEA Interproscan
CC GO:0009317 acetyl-CoA carboxylase complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
MF GO:0008192 RNA guanylyltransferase activity IEP Enrichment
MF GO:0008193 tRNA guanylyltransferase activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
MF GO:0070568 guanylyltransferase activity IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR001095 Acetyl_CoA_COase_a_su 95 237
No external refs found!