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  5. Transcript_contig_54181

Transcript_contig_54181 (54181)


Aliases : 54181

Description : AMP-dependent synthetase/ligase; AMP-binding enzyme, C-terminal domain [Interproscan].


Gene families : OG_01_0000081 (OrthoFinder) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Transcript_contig_54181
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021070.14 tig00021070_g17822.t1 Malonate--CoA ligase OS=Arabidopsis thaliana 0.01 OrthoFinder
Cz07g13050.t1 No alias AMP-binding enzyme, C-terminal domain; AMP-dependent... 0.01 OrthoFinder
Dusal.2224s00001.1 33195745 AMP-dependent synthetase/ligase [Interproscan]. 0.01 OrthoFinder
OT_01G06180.1 No alias AMP-dependent synthetase/ligase; AMP-binding enzyme,... 0.02 OrthoFinder
PTI_01G11010.1 No alias AMP-binding enzyme, C-terminal domain;... 0.01 OrthoFinder
PTI_09G01950.1 No alias AMP-binding enzyme, C-terminal domain; AMP-dependent... 0.01 OrthoFinder
UNPLg00607.t1 No alias AMP-binding enzyme, C-terminal domain; AMP-dependent... 0.01 OrthoFinder
Vocar.0001s0023.1 32885191 AMP-binding enzyme, C-terminal domain; AMP-dependent... 0.02 OrthoFinder
lcl|LHPG02000015.1_cds_PRW33815.1_2939 PRW33815 AMP-binding isoform A 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
CC GO:0016592 mediator complex IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Enrichment
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 24 478
IPR025110 AMP-bd_C 487 528
No external refs found!