Transcript_contig_54175 (54175)


Aliases : 54175

Description : Protein of unknown function PDDEXK-like [Interproscan].


Gene families : OG_01_0000763 (OrthoFinder) Phylogenetic Tree(s): OG0000763_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_54175
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
Cre15.g634750 30783766 No description available 0.02 OrthoFinder
Cz03g09060.t1 No alias Protein of unknown function PDDEXK-like [Interproscan]. 0.03 OrthoFinder
Vocar.0019s0094.1 32892703 Protein of unknown function PDDEXK-like [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58170.1_7971 PRW58170 Translation initiation factor IF-3 0.02 OrthoFinder
lcl|LHPG02000026.1_cds_PRW18304.1_5772 PRW18304 Translation initiation factor IF-3 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 120 213
No external refs found!