Transcript_contig_54115 (54115)

Aliases : 54115

Description : Cyclin, N-terminal; Cyclin, C-terminal domain [Interproscan].

Gene families : OG_01_0001088 (OrthoFinder) Phylogenetic Tree(s): OG0001088_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Transcript_contig_54115
Cluster	HCCA: Cluster_49

Target	Alias	Description	ECC score	Gene Family Method
Cz03g12080.t1	No alias	Cyclin, C-terminal domain; Cyclin, N-terminal [Interproscan].	0.01	OrthoFinder
Transcript_contig_79832	79832	NodB homology domain [Interproscan].	0.02	OrthoFinder
lcl\|LHPG02000001.1_cds_PRW61614.1_423	PRW61614	Chitin	0.02	OrthoFinder
lcl\|LHPG02000007.1_cds_PRW57450.1_9126	PRW57450	Chitin	0.02	OrthoFinder
lcl\|LHPG02000009.1_cds_PRW56282.1_10029	PRW56282	NodB homology domain [Interproscan].	0.02	OrthoFinder
lcl\|LHPG02000014.1_cds_PRW39180.1_2682	PRW39180	NodB homology domain [Interproscan].	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0018995	host cellular component	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003924	GTPase activity	IEP	Enrichment
CC	GO:0005737	cytoplasm	IEP	Enrichment
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR004367	Cyclin_C-dom	209	319
IPR006671	Cyclin_N	75	190

External Links

No external refs found!