Transcript_contig_54066 (54066)

Aliases : 54066

Description : Carbohydrate binding module family 20 [Interproscan].

Gene families : OG_01_0000144 (OrthoFinder) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Transcript_contig_54066
Cluster	HCCA: Cluster_128

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000955.21	tig00000955_g5796.t1	No description available	0.01	OrthoFinder
Vocar.0009s0363.1	32893304	Carbohydrate binding module family 20 [Interproscan].	0.02	OrthoFinder
XM_002502680.1	MICPUN_108362, 108362	Carbohydrate-binding module family 20 protein	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0030246	carbohydrate binding	None	Extended
MF	GO:0030247	polysaccharide binding	None	Extended
MF	GO:2001070	starch binding	IEA	Interproscan

Type	GO Term	Name	Evidence	Source
MF	GO:0008236	serine-type peptidase activity	IEP	Enrichment
CC	GO:0016021	integral component of membrane	IEP	Enrichment
MF	GO:0016779	nucleotidyltransferase activity	IEP	Enrichment
MF	GO:0017171	serine hydrolase activity	IEP	Enrichment
CC	GO:0031224	intrinsic component of membrane	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002044	CBM_fam20	51	135

External Links

No external refs found!