Transcript_contig_54058 (54058)


Aliases : 54058

Description : Bile acid:sodium symporter/arsenical resistance protein Acr3 [Interproscan].


Gene families : OG_01_0000676 (OrthoFinder) Phylogenetic Tree(s): OG0000676_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_54058
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
Sro876_g214470.1 Contig165.g1862 Probable sodium/metabolite cotransporter BASS1, chloroplastic 0.01 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495775.1_1773 KAA8495775 Putative sodium/metabolite cotransporter BASS1, chloroplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
MF GO:0008131 primary amine oxidase activity IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0048038 quinone binding IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR002657 BilAc:Na_symport/Acr3 114 288
No external refs found!