Transcript_contig_54038 (54038)


Aliases : 54038

Description : Hypothetical protein


Gene families : OG_01_0003004 (OrthoFinder) Phylogenetic Tree(s): OG0003004_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_54038
Cluster HCCA: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
Cre04.g217922 30791261 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder

  • Type GO Term Name Evidence Source

    No GO annotation available for this sequence

    Type GO Term Name Evidence Source
    CC GO:0000145 exocyst IEP Enrichment
    CC GO:0000151 ubiquitin ligase complex IEP Enrichment
    MF GO:0003674 molecular_function IEP Enrichment
    MF GO:0003676 nucleic acid binding IEP Enrichment
    MF GO:0003677 DNA binding IEP Enrichment
    MF GO:0003824 catalytic activity IEP Enrichment
    MF GO:0003993 acid phosphatase activity IEP Enrichment
    MF GO:0004180 carboxypeptidase activity IEP Enrichment
    MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
    MF GO:0004497 monooxygenase activity IEP Enrichment
    MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
    MF GO:0005488 binding IEP Enrichment
    BP GO:0006508 proteolysis IEP Enrichment
    BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
    BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
    BP GO:0006887 exocytosis IEP Enrichment
    BP GO:0007165 signal transduction IEP Enrichment
    BP GO:0008150 biological_process IEP Enrichment
    MF GO:0008233 peptidase activity IEP Enrichment
    MF GO:0008236 serine-type peptidase activity IEP Enrichment
    MF GO:0008238 exopeptidase activity IEP Enrichment
    BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
    BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
    MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Enrichment
    BP GO:0016567 protein ubiquitination IEP Enrichment
    MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
    MF GO:0016787 hydrolase activity IEP Enrichment
    MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
    MF GO:0016791 phosphatase activity IEP Enrichment
    MF GO:0017171 serine hydrolase activity IEP Enrichment
    MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
    BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
    BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
    BP GO:0032940 secretion by cell IEP Enrichment
    MF GO:0034061 DNA polymerase activity IEP Enrichment
    MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Enrichment
    BP GO:0035556 intracellular signal transduction IEP Enrichment
    MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
    BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
    BP GO:0044238 primary metabolic process IEP Enrichment
    BP GO:0046903 secretion IEP Enrichment
    MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
    MF GO:0061630 ubiquitin protein ligase activity IEP Enrichment
    MF GO:0061659 ubiquitin-like protein ligase activity IEP Enrichment
    MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
    BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
    BP GO:0071704 organic substance metabolic process IEP Enrichment
    MF GO:0097159 organic cyclic compound binding IEP Enrichment
    CC GO:0099023 vesicle tethering complex IEP Enrichment
    MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
    BP GO:0140352 export from cell IEP Enrichment
    CC GO:0140535 intracellular protein-containing complex IEP Enrichment
    MF GO:1901363 heterocyclic compound binding IEP Enrichment
    CC GO:1990234 transferase complex IEP Enrichment

    No InterPro domains available for this sequence

  • No external refs found!