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  5. Transcript_contig_53932

Transcript_contig_53932 (53932)


Aliases : 53932

Description : Pentacotripeptide-repeat region of PRORP [Interproscan].


Gene families : OG_01_0022935 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_53932
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
lcl|LHPG02000010.1_cds_PRW51133.1_1170 PRW51133 Glutathione S-transferase theta-2B 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
InterPro domains Description Start Stop
IPR033443 PPR_long 280 370
No external refs found!