Transcript_contig_53909 (53909)


Aliases : 53909

Description : Hypothetical protein


Gene families : OG_01_0002294 (OrthoFinder) Phylogenetic Tree(s): OG0002294_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_53909
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000545.28 tig00000545_g2000.t1 Cytoskeleton.microtubular network.microtubule Tubulin... 0.01 OrthoFinder
Cz05g24160.t1 No alias Gamma tubulin complex component protein, N-terminal;... 0.02 OrthoFinder
XM_002505964.1 MICPUN_64168, 64168 Gamma-tubulin complex 0.01 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59035.1_7256 PRW59035 Gamma-tubulin complex component 2 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP Enrichment
CC GO:0000775 chromosome, centromeric region IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004100 chitin synthase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006022 aminoglycan metabolic process IEP Enrichment
BP GO:0006023 aminoglycan biosynthetic process IEP Enrichment
BP GO:0006030 chitin metabolic process IEP Enrichment
BP GO:0006031 chitin biosynthetic process IEP Enrichment
BP GO:0006040 amino sugar metabolic process IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0007049 cell cycle IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
MF GO:0008375 acetylglucosaminyltransferase activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0046349 amino sugar biosynthetic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
CC GO:0098687 chromosomal region IEP Enrichment
BP GO:1901071 glucosamine-containing compound metabolic process IEP Enrichment
BP GO:1901073 glucosamine-containing compound biosynthetic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!