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  5. Transcript_contig_53904

Transcript_contig_53904 (53904)


Aliases : 53904

Description : Protein of unknown function PDDEXK-like [Interproscan].


Gene families : OG_01_0000763 (OrthoFinder) Phylogenetic Tree(s): OG0000763_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_53904
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
Cz11g06010.t1 No alias Protein of unknown function PDDEXK-like [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000086.1_cds_GFH07302.1_1779 HaLaN_02084, GFH07302 Hypothetical protein 0.03 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58170.1_7971 PRW58170 Translation initiation factor IF-3 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP Enrichment
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006897 endocytosis IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
CC GO:0008287 protein serine/threonine phosphatase complex IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
MF GO:0019888 protein phosphatase regulator activity IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0052646 alditol phosphate metabolic process IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
BP GO:1901136 carbohydrate derivative catabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1903293 phosphatase complex IEP Enrichment
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 52 225
No external refs found!