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Transcript_contig_53890 (53890)


Aliases : 53890

Description : Vacuolar protein sorting-associated protein 13, SHR-binding domain; C2 domain [Interproscan].


Gene families : OG_01_0004143 (OrthoFinder) Phylogenetic Tree(s): OG0004143_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_53890
Cluster HCCA: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
Dusal.0054s00019.1 33201641 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
InterPro domains Description Start Stop
IPR000008 C2_dom 1166 1278
IPR000008 C2_dom 914 992
IPR009543 SHR-BD 240 453
No external refs found!