Transcript_contig_53720 (53720)

Aliases : 53720

Description : Glycine cleavage system P protein [Interproscan].

Gene families : OG_01_0003122 (OrthoFinder) Phylogenetic Tree(s): OG0003122_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Transcript_contig_53720
Cluster	HCCA: Cluster_101

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00021489.31	tig00021489_g21681.t1	Photosynthesis.photorespiration.glycine cleavage...	0.01	OrthoFinder
Cre12.g534800	30793415, GCSP	Photosynthesis.photorespiration.glycine cleavage...	0.02	OrthoFinder
Cz05g11130.t1	No alias	Glycine cleavage system P protein [Interproscan].	0.01	OrthoFinder
Dusal.0093s00023.1	33185321	Glycine cleavage system P protein [Interproscan].	0.02	OrthoFinder
PTI_16G00900.1	No alias	Glycine cleavage system P protein [Interproscan].	0.01	OrthoFinder
Vocar.0034s0106.1	32893075	Glycine cleavage system P protein [Interproscan].	0.02	OrthoFinder
XM_002503431.1	MICPUN_104877, 104877	Glycine cleavage system p-protein (GCSP)	0.01	OrthoFinder
lcl\|BLLF01002223.1_cds_GFH23233.1_17710	HaLaN_20818, GFH23233	Glycine cleavage system P protein	0.02	OrthoFinder
lcl\|LHPG02000008.1_cds_PRW56792.1_9671	PRW56792	Glycine cleavage system p	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004375	glycine dehydrogenase (decarboxylating) activity	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006544	glycine metabolic process	None	Extended
BP	GO:0006546	glycine catabolic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009063	cellular amino acid catabolic process	None	Extended
BP	GO:0009069	serine family amino acid metabolic process	None	Extended
BP	GO:0009071	serine family amino acid catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016054	organic acid catabolic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	None	Extended
MF	GO:0016642	oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044282	small molecule catabolic process	None	Extended
BP	GO:0046395	carboxylic acid catabolic process	None	Extended
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901606	alpha-amino acid catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Enrichment
MF	GO:0005488	binding	IEP	Enrichment
MF	GO:0005515	protein binding	IEP	Enrichment
MF	GO:0008080	N-acetyltransferase activity	IEP	Enrichment
MF	GO:0008483	transaminase activity	IEP	Enrichment
MF	GO:0016407	acetyltransferase activity	IEP	Enrichment
MF	GO:0016410	N-acyltransferase activity	IEP	Enrichment
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	Enrichment
MF	GO:0016787	hydrolase activity	IEP	Enrichment
BP	GO:0017038	protein import	IEP	Enrichment
MF	GO:0019842	vitamin binding	IEP	Enrichment
MF	GO:0030170	pyridoxal phosphate binding	IEP	Enrichment
MF	GO:0036094	small molecule binding	IEP	Enrichment
MF	GO:0043167	ion binding	IEP	Enrichment
MF	GO:0043168	anion binding	IEP	Enrichment
MF	GO:0043565	sequence-specific DNA binding	IEP	Enrichment
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Enrichment
MF	GO:0070279	vitamin B6 binding	IEP	Enrichment
MF	GO:0071949	FAD binding	IEP	Enrichment
MF	GO:0097159	organic cyclic compound binding	IEP	Enrichment
MF	GO:1901265	nucleoside phosphate binding	IEP	Enrichment
MF	GO:1901363	heterocyclic compound binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR020581	GDC_P	549	800
IPR020581	GDC_P	82	508

External Links

No external refs found!

Transcript_contig_53720 (53720)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation