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Transcript_contig_53713 (53713)


Aliases : 53713

Description : ABC-2 type transporter; ABC transporter-like [Interproscan].


Gene families : OG_01_0000987 (OrthoFinder) Phylogenetic Tree(s): OG0000987_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_53713
Cluster HCCA: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
Cre07.g313250 30774970 ABC transporter G family member 33 OS=Arabidopsis thaliana 0.01 OrthoFinder
OT_04G03580.1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010038 response to metal ion IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 364 571
IPR003439 ABC_transporter-like_ATP-bd 64 215
No external refs found!