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  5. Transcript_contig_5166

Transcript_contig_5166 (5166)


Aliases : 5166

Description : Hypothetical protein


Gene families : OG_01_0002470 (OrthoFinder) Phylogenetic Tree(s): OG0002470_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_5166
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
Sro256_g100580.1 Contig3587.g27703 PAN2-PAN3 deadenylation complex catalytic subunit PAN2 0.01 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58395.1_7777 PRW58395 PAB-dependent poly(A)-specific ribonuclease subunit 2 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment

No InterPro domains available for this sequence

No external refs found!