1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00000691.35

Cpa|evm.model.tig00000691.35 (tig00000691_g3188.t1)


Aliases : tig00000691_g3188.t1

Description : Probable ATP-dependent DNA helicase CHR12 OS=Arabidopsis thaliana


Gene families : OG_01_0000017 (OrthoFinder) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000691.35
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Cre03.g158550 30787160 CHD3-type chromatin-remodeling factor PICKLE... 0.04 OrthoFinder
Cz01g25030.t1 No alias Helicase, C-terminal; Chromo domain; Domain of unknown... 0.02 OrthoFinder
Cz04g34020.t1 No alias Helicase, C-terminal; Chromo domain; SNF2-related,... 0.02 OrthoFinder
Cz05g37180.t1 No alias SNF2-related, N-terminal domain; Helicase, C-terminal... 0.02 OrthoFinder
EOD25651 No alias Helicase, C-terminal; SNF2-related, N-terminal domain... 0.02 OrthoFinder
EOD31071 No alias Helicase, C-terminal; SNF2-related, N-terminal domain... 0.02 OrthoFinder
EOD34139 No alias Hypothetical protein [Ensembl]. 0.01 OrthoFinder
EOD41894 No alias SNF2-related, N-terminal domain [Interproscan]. 0.01 OrthoFinder
EOD41895 No alias Helicase, C-terminal [Interproscan]. 0.01 OrthoFinder
EOD41956 No alias Chromo domain; Helicase, C-terminal; SNF2-related,... 0.01 OrthoFinder
OT_01G05670.1 No alias Helicase, C-terminal; SNF2-related, N-terminal domain;... 0.04 OrthoFinder
OT_06G03660.1 No alias Helicase, C-terminal; SNF2-related, N-terminal domain;... 0.03 OrthoFinder
OT_17G01920.1 No alias Helicase, C-terminal; SNF2-related, N-terminal domain... 0.03 OrthoFinder
SymbC1.scaffold1517.8 1517.8 SNF2-related, N-terminal domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_53936 53936 Helicase, C-terminal; SNF2-related, N-terminal domain;... 0.02 OrthoFinder
Transcript_contig_55210 55210 Helicase, C-terminal; SNF2-related, N-terminal domain... 0.01 OrthoFinder
XM_002503125.1 MICPUN_91017, 91017 SNF2 super family 0.02 OrthoFinder
XM_002507782.1 MICPUN_60518, 60518 SNF2 super family 0.03 OrthoFinder
XM_003061313.1 MicpuC2_50939, 50939 SNF2 super family 0.01 OrthoFinder
XM_003062178.1 MicpuC2_21039, 21039 SNF2 super family 0.02 OrthoFinder
XM_003062821.1 MicpuC2_52710, 52710 FY-rich, N-terminal; Helicase, C-terminal; FY-rich,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Enrichment
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Enrichment
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
InterPro domains Description Start Stop
IPR000330 SNF2_N 262 292
IPR000330 SNF2_N 325 484
IPR001650 Helicase_C 534 658
No external refs found!