Transcript_contig_3457 (3457)

Aliases : 3457

Description : R3H domain [Interproscan].

Gene families : OG_01_0000385 (OrthoFinder) Phylogenetic Tree(s): OG0000385_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Transcript_contig_3457
Cluster	HCCA: Cluster_227

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cpa\|evm.model.tig00000852.42	tig00000852_g5051.t1	No description available	0.01	OrthoFinder
lcl\|LHPG02000014.1_cds_PRW39071.1_2552	PRW39071	DNA-binding SMUBP-2 isoform A	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Enrichment
MF	GO:0004540	ribonuclease activity	IEP	Enrichment
BP	GO:0006352	DNA-templated transcription, initiation	IEP	Enrichment
MF	GO:0140110	transcription regulator activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001374	R3H_dom	46	85

External Links

No external refs found!