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Aliases : 3007
Description : Hypothetical protein
Gene families : OG_01_0002464 (OrthoFinder) Phylogenetic Tree(s): OG0002464_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Transcript_contig_3007 | |
| Cluster | HCCA: Cluster_68 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00021179.21 | tig00021179_g19236.t1 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder | |
| Cre06.g278175 | 30779333 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.02 | OrthoFinder | |
| Cz09g19070.t1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| Cz09g19080.t1 | No alias | WD40 repeat [Interproscan]. | 0.02 | OrthoFinder | |
| Dusal.0191s00014.1 | 33186458 | WD40 repeat [Interproscan]. | 0.01 | OrthoFinder | |
| OT_07G01850.1 | No alias | WD40 repeat [Interproscan]. | 0.04 | OrthoFinder | |
| PTI_01G11550.1 | No alias | WD40 repeat [Interproscan]. | 0.05 | OrthoFinder | |
| Sro382_g131180.1 | Contig4152.g31702 | SnoRNP-associated protein-like EMB2271 | 0.03 | OrthoFinder | |
| TP04G04770.1 | No alias | WD40 repeat [Interproscan]. | 0.02 | OrthoFinder | |
| XM_002503879.1 | MICPUN_60028, 60028 | U3 snornp-associated-like WD40 repeat-containing protein | 0.03 | OrthoFinder | |
| XM_003054970.1 | MicpuC2_50325, 50325 | U3 snornp-associated-like WD40 repeat-containing protein | 0.03 | OrthoFinder | |
| lcl|LHPG02000021.1_cds_PRW20874.1_5038 | PRW20874 | U3 small nucleolar RNA-interacting 2 | 0.05 | OrthoFinder | |
| lcl|VRMN01000001.1_cds_KAA8498077.1_7030 | KAA8498077 | U3 snoRNP-associated protein-like YAOH | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003729 | mRNA binding | IEP | Enrichment |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Enrichment |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Enrichment |
| MF | GO:0005198 | structural molecule activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005739 | mitochondrion | IEP | Enrichment |
| CC | GO:0005759 | mitochondrial matrix | IEP | Enrichment |
| CC | GO:0005849 | mRNA cleavage factor complex | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006364 | rRNA processing | IEP | Enrichment |
| BP | GO:0006378 | mRNA polyadenylation | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| BP | GO:0006397 | mRNA processing | IEP | Enrichment |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Enrichment |
| BP | GO:0006457 | protein folding | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| BP | GO:0016071 | mRNA metabolic process | IEP | Enrichment |
| BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Enrichment |
| CC | GO:0019867 | outer membrane | IEP | Enrichment |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Enrichment |
| CC | GO:0030684 | preribosome | IEP | Enrichment |
| BP | GO:0031123 | RNA 3'-end processing | IEP | Enrichment |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | Enrichment |
| CC | GO:0031974 | membrane-enclosed lumen | IEP | Enrichment |
| CC | GO:0032040 | small-subunit processome | IEP | Enrichment |
| BP | GO:0032259 | methylation | IEP | Enrichment |
| CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
| BP | GO:0042274 | ribosomal small subunit biogenesis | IEP | Enrichment |
| BP | GO:0043038 | amino acid activation | IEP | Enrichment |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
| CC | GO:0043233 | organelle lumen | IEP | Enrichment |
| BP | GO:0043631 | RNA polyadenylation | IEP | Enrichment |
| BP | GO:0044085 | cellular component biogenesis | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| CC | GO:0070013 | intracellular organelle lumen | IEP | Enrichment |
| BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |