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  5. Cpa|evm.model.tig00000663.2

Cpa|evm.model.tig00000663.2 (tig00000663_g2933.t1)


Aliases : tig00000663_g2933.t1

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG_01_0000018 (OrthoFinder) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000663.2
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Cre09.g397475 30781407 No description available 0.02 OrthoFinder
Cz10g17100.t1 No alias Myb-like DNA-binding domain [Interproscan]. 0.02 OrthoFinder
Cz15g15180.t1 No alias SANT/Myb domain [Interproscan]. 0.02 OrthoFinder
EOD17696 No alias Myb-like DNA-binding domain [Interproscan]. 0.02 OrthoFinder
OT_13G00110.1 No alias Myb-like DNA-binding domain [Interproscan]. 0.03 OrthoFinder
Sro1233_g254780.1 Contig3336.g26176 Myb-related protein A 0.01 OrthoFinder
Sro87_g046050.1 Contig2014.g17213 Myb-related protein A 0.01 OrthoFinder
TP02G01610.1 No alias SANT/Myb domain; Myb-like DNA-binding domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_55654 55654 SANT/Myb domain; Myb-like DNA-binding domain [Interproscan]. 0.01 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494854.1_3384 KAA8494854 Transcription factor 0.02 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492832.1_2568 KAA8492832 Transcriptional activator Myb 0.01 OrthoFinder
lcl|VRMN01000009.1_cds_KAA8492445.1_9138 KAA8492445 Transcription factor MYB44 0.02 OrthoFinder
lcl|VRMN01000013.1_cds_KAA8491431.1_6241 KAA8491431 Transcriptional activator Myb 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
BP GO:0000723 telomere maintenance IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0009314 response to radiation IEP Enrichment
BP GO:0009416 response to light stimulus IEP Enrichment
BP GO:0009581 detection of external stimulus IEP Enrichment
BP GO:0009582 detection of abiotic stimulus IEP Enrichment
BP GO:0009583 detection of light stimulus IEP Enrichment
BP GO:0009584 detection of visible light IEP Enrichment
BP GO:0009605 response to external stimulus IEP Enrichment
BP GO:0009628 response to abiotic stimulus IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0018298 protein-chromophore linkage IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051606 detection of stimulus IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
InterPro domains Description Start Stop
IPR001005 SANT/Myb 24 73
IPR001005 SANT/Myb 80 123
No external refs found!