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  5. Cpa|evm.model.tig00000663.18

Cpa|evm.model.tig00000663.18 (tig00000663_g2951.t1)


Aliases : tig00000663_g2951.t1

No description available


Gene families : OG_01_0002214 (OrthoFinder) Phylogenetic Tree(s): OG0002214_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000663.18
Cluster HCCA: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
Cre04.g226450 30791065, PRP17 RNA processing.RNA splicing.spliceosome-associated... 0.02 OrthoFinder
TP04G00510.1 No alias WD40 repeat [Interproscan]. 0.03 OrthoFinder
Transcript_contig_58245 58245 WD40 repeat [Interproscan]. 0.02 OrthoFinder
Transcript_contig_60097 60097 WD40 repeat [Interproscan]. 0.03 OrthoFinder
XM_003055055.1 MicpuC2_50511, 50511 Anaphase-promoting complex subunit 4, WD40 domain; WD40... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
CC GO:0034464 BBSome IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 173 207
IPR001680 WD40_repeat 431 469
IPR001680 WD40_repeat 212 250
IPR001680 WD40_repeat 388 425
No external refs found!