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  5. Cpa|evm.model.tig00000076.118

Cpa|evm.model.tig00000076.118 (tig00000076_g2415.t1)


Aliases : tig00000076_g2415.t1

Description : Protein SUPPRESSOR OF QUENCHING 1, chloroplastic OS=Arabidopsis thaliana


Gene families : OG_01_0000024 (OrthoFinder) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000076.118
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
EOD06845 No alias Hypothetical protein [Ensembl]. 0.01 OrthoFinder
EOD09135 No alias Hypothetical protein [Ensembl]. 0.01 OrthoFinder
EOD21144 No alias Hypothetical protein [Ensembl]. 0.01 OrthoFinder
EOD23182 No alias Lactonase, 7-bladed beta propeller; BTB/POZ domain... 0.01 OrthoFinder
EOD25289 No alias Lactonase, 7-bladed beta propeller [Interproscan]. 0.01 OrthoFinder
EOD26390 No alias Hypothetical protein [Ensembl]. 0.01 OrthoFinder
EOD36482 No alias BTB/POZ domain; NHL repeat [Interproscan]. 0.01 OrthoFinder
EOD38772 No alias BTB/POZ domain; NHL repeat [Interproscan]. 0.01 OrthoFinder
EOD41568 No alias BTB/POZ domain [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold4294.6 4294.6 NHL repeat [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000019.1_cds_PRW32602.1_3917 PRW32602 NHL repeat-containing 2 isoform C 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
CC GO:0005891 voltage-gated calcium channel complex IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
CC GO:0034702 ion channel complex IEP Enrichment
CC GO:0034703 cation channel complex IEP Enrichment
CC GO:0034704 calcium channel complex IEP Enrichment
CC GO:0036128 CatSper complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR012336 Thioredoxin-like_fold 57 151
No external refs found!