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Transcript_contig_2040 (2040)


Aliases : 2040

Description : Radical SAM [Interproscan].


Gene families : OG_01_0002412 (OrthoFinder) Phylogenetic Tree(s): OG0002412_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_2040
Cluster HCCA: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
lcl|VRMN01000001.1_cds_KAA8499674.1_8627 KAA8499674 Oxygen-independent coproporphyrinogen-III oxidase-like protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
InterPro domains Description Start Stop
IPR007197 rSAM 74 239
No external refs found!