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  5. Cpa|evm.model.tig00000640.5

Cpa|evm.model.tig00000640.5 (tig00000640_g2759.t1)


Aliases : tig00000640_g2759.t1

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL21 component


Gene families : OG_01_0003022 (OrthoFinder) Phylogenetic Tree(s): OG0003022_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000640.5
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Cre06.g278135 30779568, RPL21 Protein biosynthesis.cytosolic ribosome.large subunit... 0.36 OrthoFinder
Cz04g01160.t1 No alias Ribosomal protein L21e [Interproscan]. 0.23 OrthoFinder
Dusal.1405s00001.1 33194454 Ribosomal protein L21e [Interproscan]. 0.13 OrthoFinder
EOD15532 No alias Ribosomal protein L21e [Interproscan]. 0.03 OrthoFinder
EOD17730 No alias Ribosomal protein L21e [Interproscan]. 0.03 OrthoFinder
OT_16G01800.1 No alias Ribosomal protein L21e [Interproscan]. 0.16 OrthoFinder
PTI_11G01510.1 No alias Ribosomal protein L21e [Interproscan]. 0.37 OrthoFinder
Sro2397_g326060.1 Contig2368.g19493 60S ribosomal protein L21 0.41 OrthoFinder
SymbC1.scaffold5018.4 5018.4 Ribosomal protein L21e [Interproscan]. 0.06 OrthoFinder
TP07G05810.1 No alias Ribosomal protein L21e [Interproscan]. 0.37 OrthoFinder
Vocar.0002s0600.1 32890806 Ribosomal protein L21e [Interproscan]. 0.15 OrthoFinder
XM_002506309.1 MICPUN_95995, 95995 Ribosomal protein L21e [Interproscan]. 0.35 OrthoFinder
XM_003063429.1 MicpuC2_49736, 49736 Ribosomal protein L21e [Interproscan]. 0.15 OrthoFinder
lcl|BLLF01002302.1_cds_GFH23564.1_18041 HaLaN_21192, GFH23564 60S ribosomal protein L21-1 0.09 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57524.1_9173 PRW57524 60S ribosomal L21-1-like 0.13 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499114.1_8067 KAA8499114 60S ribosomal protein L21-A 0.13 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001147 Ribosomal_L21e 1 101
No external refs found!