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Aliases : tig00000632_g2738.t1
Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL34 component
Gene families : OG_01_0004984 (OrthoFinder) Phylogenetic Tree(s): OG0004984_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00000632.3 | |
| Cluster | HCCA: Cluster_43 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre16.g661050 | 30777324, RPL34 | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.15 | OrthoFinder | |
| Dusal.0013s00032.1 | 33200934 | Ribosomal protein L34Ae [Interproscan]. | 0.1 | OrthoFinder | |
| OT_04G04220.1 | No alias | Ribosomal protein L34Ae [Interproscan]. | 0.06 | OrthoFinder | |
| PTI_04G00620.1 | No alias | Ribosomal protein L34Ae [Interproscan]. | 0.15 | OrthoFinder | |
| Sro327_g118460.1 | Contig839.g9254 | 60S ribosomal protein L34 | 0.15 | OrthoFinder | |
| TP04G05710.1 | No alias | Ribosomal protein L34Ae [Interproscan]. | 0.19 | OrthoFinder | |
| Vocar.0004s0133.1 | 32889701 | Ribosomal protein L34Ae [Interproscan]. | 0.07 | OrthoFinder | |
| XM_002504768.1 | MICPUN_86588, 86588 | Ribosomal protein L34Ae [Interproscan]. | 0.07 | OrthoFinder | |
| lcl|VRMN01000003.1_cds_KAA8495412.1_1410 | KAA8495412 | 60S ribosomal protein L34 | 0.05 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| CC | GO:0005840 | ribosome | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005525 | GTP binding | IEP | Enrichment |
| CC | GO:0005739 | mitochondrion | IEP | Enrichment |
| BP | GO:0006412 | translation | IEP | Enrichment |
| BP | GO:0006518 | peptide metabolic process | IEP | Enrichment |
| MF | GO:0008017 | microtubule binding | IEP | Enrichment |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | Enrichment |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
| MF | GO:0015631 | tubulin binding | IEP | Enrichment |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Enrichment |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Enrichment |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Enrichment |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Enrichment |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Enrichment |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Enrichment |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Enrichment |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Enrichment |
| BP | GO:0043604 | amide biosynthetic process | IEP | Enrichment |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Enrichment |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR008195 | Ribosomal_L34Ae | 1 | 95 |
| No external refs found! |