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  5. Cpa|evm.model.tig00000622.21

Cpa|evm.model.tig00000622.21 (tig00000622_g2634.t1)


Aliases : tig00000622_g2634.t1

Description : Protein TAB2 homolog, chloroplastic OS=Zea mays


Gene families : OG_01_0002858 (OrthoFinder) Phylogenetic Tree(s): OG0002858_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000622.21
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
Cre17.g702500 30782205, TAB2 Protein TAB2 homolog, chloroplastic OS=Arabidopsis thaliana 0.05 OrthoFinder
Cz09g03050.t1 No alias Tab2-like [Interproscan]. 0.02 OrthoFinder
EOD32406 No alias Tab2-like [Interproscan]. 0.01 OrthoFinder
EOD39107 No alias Tab2-like [Interproscan]. 0.02 OrthoFinder
OT_09G01390.1 No alias Tab2-like [Interproscan]. 0.03 OrthoFinder
Transcript_contig_56728 56728 Tab2-like [Interproscan]. 0.02 OrthoFinder
XM_002506091.1 MICPUN_71227, 71227 Tab2-like [Interproscan]. 0.03 OrthoFinder
XM_003056709.1 MicpuC2_45348, 45348 Tab2-like [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01005293.1_cds_GFH31017.1_25494 HaLaN_29964, GFH31017 Tab2-like [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000012.1_cds_PRW45127.1_1861 PRW45127 RNA binding 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
BP GO:0007009 plasma membrane organization IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0015748 organophosphate ester transport IEP Enrichment
BP GO:0015914 phospholipid transport IEP Enrichment
BP GO:0015994 chlorophyll metabolic process IEP Enrichment
BP GO:0015995 chlorophyll biosynthetic process IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
BP GO:0017121 plasma membrane phospholipid scrambling IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0034204 lipid translocation IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0045332 phospholipid translocation IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0097035 regulation of membrane lipid distribution IEP Enrichment
InterPro domains Description Start Stop
IPR009472 Tab2-like 166 253
IPR009472 Tab2-like 288 394
No external refs found!