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  5. Cpa|evm.model.tig00000615.50

Cpa|evm.model.tig00000615.50 (tig00000615_g2580.t1)


Aliases : tig00000615_g2580.t1

No description available


Gene families : OG_01_0000454 (OrthoFinder) Phylogenetic Tree(s): OG0000454_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000615.50
Cluster HCCA: Cluster_200

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000459.51 tig00000459_g1113.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00000551.1 tig00000551_g2023.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00000849.1 tig00000849_g4739.t1 No description available 0.04 OrthoFinder
Vocar.0031s0043.1 32890041 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
MF GO:0060090 molecular adaptor activity IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
InterPro domains Description Start Stop
IPR026854 VPS13-like_N 2 112
IPR009543 SHR-BD 1933 1985
IPR009543 SHR-BD 1781 1892
IPR031646 VPS13_N2 144 202
IPR031642 VPS13_mid_rpt 570 681
IPR031645 VPS13_C 2215 2307
IPR031645 VPS13_C 2320 2368
No external refs found!