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  5. Cpa|evm.model.tig00000615.44

Cpa|evm.model.tig00000615.44 (tig00000615_g2572.t1)


Aliases : tig00000615_g2572.t1

Description : Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SCC1 mitotic-specific Kleisin-type component


Gene families : OG_01_0001069 (OrthoFinder) Phylogenetic Tree(s): OG0001069_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000615.44
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Cre09.g412450 30781224 Cell cycle.mitosis and meiosis.sister chromatid... 0.03 OrthoFinder
Cz18g00170.t1 No alias Rad21/Rec8-like protein, N-terminal; Rad21/Rec8-like... 0.03 OrthoFinder
Dusal.0085s00013.1 33196220 Rad21/Rec8-like protein, N-terminal [Interproscan]. 0.01 OrthoFinder
EOD22830 No alias Rad21/Rec8-like protein, C-terminal, eukaryotic;... 0.02 OrthoFinder
OT_06G02980.1 No alias Rad21/Rec8-like protein, N-terminal; Rad21/Rec8-like... 0.04 OrthoFinder
PTI_04G04560.1 No alias Rad21/Rec8-like protein, N-terminal; Rad21/Rec8-like... 0.03 OrthoFinder
Sro326_g118220.1 Contig1080.g10510 Rad21-like protein 1 0.01 OrthoFinder
Transcript_contig_4480 4480 Rad21/Rec8-like protein, N-terminal [Interproscan]. 0.01 OrthoFinder
Vocar.0013s0213.1 32896435 Rad21/Rec8-like protein, C-terminal, eukaryotic;... 0.02 OrthoFinder
XM_003062068.1 MicpuC2_69885, 69885 Rad21/Rec8-like protein, C-terminal, eukaryotic [Interproscan]. 0.02 OrthoFinder
XM_003062069.1 MicpuC2_21167, 21167 Rad21/Rec8-like protein, N-terminal [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57089.1_9089 PRW57089 Meiotic recombination 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005856 cytoskeleton IEP Enrichment
CC GO:0005885 Arp2/3 protein complex IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0007015 actin filament organization IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010638 positive regulation of organelle organization IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0018298 protein-chromophore linkage IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
BP GO:0030832 regulation of actin filament length IEP Enrichment
BP GO:0030833 regulation of actin filament polymerization IEP Enrichment
BP GO:0030838 positive regulation of actin filament polymerization IEP Enrichment
BP GO:0031334 positive regulation of protein-containing complex assembly IEP Enrichment
BP GO:0032271 regulation of protein polymerization IEP Enrichment
BP GO:0032273 positive regulation of protein polymerization IEP Enrichment
BP GO:0032535 regulation of cellular component size IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0032956 regulation of actin cytoskeleton organization IEP Enrichment
BP GO:0032970 regulation of actin filament-based process IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043138 3'-5' DNA helicase activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043254 regulation of protein-containing complex assembly IEP Enrichment
BP GO:0044087 regulation of cellular component biogenesis IEP Enrichment
BP GO:0044089 positive regulation of cellular component biogenesis IEP Enrichment
BP GO:0045010 actin nucleation IEP Enrichment
BP GO:0048518 positive regulation of biological process IEP Enrichment
BP GO:0048522 positive regulation of cellular process IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051130 positive regulation of cellular component organization IEP Enrichment
BP GO:0051493 regulation of cytoskeleton organization IEP Enrichment
BP GO:0051495 positive regulation of cytoskeleton organization IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
BP GO:0090066 regulation of anatomical structure size IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:0097435 supramolecular fiber organization IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
BP GO:0110053 regulation of actin filament organization IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1902903 regulation of supramolecular fiber organization IEP Enrichment
BP GO:1902905 positive regulation of supramolecular fiber organization IEP Enrichment
InterPro domains Description Start Stop
IPR006909 Rad21/Rec8_C_eu 526 575
IPR006910 Rad21_Rec8_N 1 103
No external refs found!