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Aliases : 10133
Description : Regulator of chromosome condensation, RCC1 [Interproscan].
Gene families : OG_01_0000020 (OrthoFinder) Phylogenetic Tree(s): OG0000020_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Transcript_contig_10133 | |
| Cluster | HCCA: Cluster_48 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00021318.63 | tig00021318_g20183.t1 | Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana | 0.02 | OrthoFinder | |
| Cre02.g089274 | 30785097 | Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana | 0.02 | OrthoFinder | |
| Cz08g00250.t1 | No alias | Regulator of chromosome condensation, RCC1; Regulator of... | 0.01 | OrthoFinder | |
| Cz14g02070.t1 | No alias | Regulator of chromosome condensation, RCC1 [Interproscan]. | 0.02 | OrthoFinder | |
| Dusal.0150s00017.1 | 33196063 | Regulator of chromosome condensation, RCC1 [Interproscan]. | 0.02 | OrthoFinder | |
| EOD22353 | No alias | E3 ubiquitin ligase [Ensembl]. | 0.01 | OrthoFinder | |
| PTI_30G01200.1 | No alias | Regulator of chromosome condensation (RCC1) repeat;... | 0.02 | OrthoFinder | |
| Sro443_g143990.1 | Contig715.g8245 | Ultraviolet-B receptor UVR8 | 0.02 | OrthoFinder | |
| TP03G07260.1 | No alias | Regulator of chromosome condensation, RCC1 [Interproscan]. | 0.01 | OrthoFinder | |
| Vocar.0001s0860.1 | 32886041 | Regulator of chromosome condensation, RCC1 [Interproscan]. | 0.02 | OrthoFinder | |
| XM_003054727.1 | MicpuC2_46092, 46092 | Regulator of chromosome condensation, RCC1 [Interproscan]. | 0.01 | OrthoFinder | |
| lcl|BLLF01000610.1_cds_GFH13424.1_7901 | HaLaN_09308, GFH13424 | Regulator of chromosome condensation, RCC1 [Interproscan]. | 0.01 | OrthoFinder | |
| lcl|BLLF01000950.1_cds_GFH16129.1_10606 | HaLaN_12494, GFH16129 | Regulator of chromosome condensation, RCC1 [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|LHPG02000003.1_cds_PRW59483.1_6331 | PRW59483 | Ultraviolet-B receptor UVR8 isoform A | 0.01 | OrthoFinder | |
| lcl|LHPG02000003.1_cds_PRW59484.1_6332 | PRW59484 | Ultraviolet-B receptor UVR8 isoform B | 0.01 | OrthoFinder | |
| lcl|LHPG02000025.1_cds_PRW20195.1_5746 | PRW20195 | RCC2-like protein | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005506 | iron ion binding | IEP | Enrichment |
| BP | GO:0006811 | ion transport | IEP | Enrichment |
| BP | GO:0006812 | cation transport | IEP | Enrichment |
| BP | GO:0006813 | potassium ion transport | IEP | Enrichment |
| MF | GO:0008324 | cation transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015075 | ion transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015297 | antiporter activity | IEP | Enrichment |
| MF | GO:0015298 | solute:cation antiporter activity | IEP | Enrichment |
| MF | GO:0015299 | solute:proton antiporter activity | IEP | Enrichment |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Enrichment |
| MF | GO:0020037 | heme binding | IEP | Enrichment |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0022853 | active ion transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Enrichment |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Enrichment |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| No external refs found! |