- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : PRW05780
Description : Water chloroplastic-like
Gene families : OG_01_0000144 (OrthoFinder) Phylogenetic Tree(s): OG0000144_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|LHPG02000029.1_cds_PRW05780.1_6098 | |
| Cluster | HCCA: Cluster_16 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre09.g407501 | 30780213 | No description available | 0.03 | OrthoFinder | |
| OT_10G00460.1 | No alias | Carbohydrate binding module family 20 [Interproscan]. | 0.03 | OrthoFinder | |
| Transcript_contig_56883 | 56883 | Carbohydrate binding module family 20; PPC89 centrosome... | 0.03 | OrthoFinder | |
| Vocar.0001s1160.1 | 32885421 | Carbohydrate binding module family 20 [Interproscan]. | 0.02 | OrthoFinder | |
| Vocar.0011s0329.1 | 32895161 | Carbohydrate binding module family 20 [Interproscan]. | 0.02 | OrthoFinder | |
| XM_003060790.1 | MicpuC2_41138, 41138 | Carbohydrate-binding module family 20 protein | 0.02 | OrthoFinder | |
| lcl|BLLF01000260.1_cds_GFH09765.1_4242 | HaLaN_04969, GFH09765 | CBM20 domain-containing protein | 0.05 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:2001070 | starch binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006081 | cellular aldehyde metabolic process | IEP | Enrichment |
| BP | GO:0009240 | isopentenyl diphosphate biosynthetic process | IEP | Enrichment |
| BP | GO:0010109 | regulation of photosynthesis | IEP | Enrichment |
| BP | GO:0010207 | photosystem II assembly | IEP | Enrichment |
| MF | GO:0010242 | oxygen evolving activity | IEP | Enrichment |
| MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | Enrichment |
| MF | GO:0016726 | oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor | IEP | Enrichment |
| MF | GO:0016872 | intramolecular lyase activity | IEP | Enrichment |
| BP | GO:0019288 | isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | IEP | Enrichment |
| BP | GO:0019682 | glyceraldehyde-3-phosphate metabolic process | IEP | Enrichment |
| BP | GO:0019725 | cellular homeostasis | IEP | Enrichment |
| BP | GO:0030163 | protein catabolic process | IEP | Enrichment |
| BP | GO:0042548 | regulation of photosynthesis, light reaction | IEP | Enrichment |
| BP | GO:0042549 | photosystem II stabilization | IEP | Enrichment |
| BP | GO:0043467 | regulation of generation of precursor metabolites and energy | IEP | Enrichment |
| BP | GO:0045454 | cell redox homeostasis | IEP | Enrichment |
| BP | GO:0046490 | isopentenyl diphosphate metabolic process | IEP | Enrichment |
| BP | GO:0050992 | dimethylallyl diphosphate biosynthetic process | IEP | Enrichment |
| BP | GO:0050993 | dimethylallyl diphosphate metabolic process | IEP | Enrichment |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Enrichment |
| MF | GO:0051745 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity | IEP | Enrichment |
| CC | GO:0098796 | membrane protein complex | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002044 | CBM_fam20 | 75 | 158 |
| No external refs found! |