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  5. lcl|LHPG02000029.1_cds_PRW05775.1_6063

lcl|LHPG02000029.1_cds_PRW05775.1_6063 (PRW05775)


Aliases : PRW05775

Description : Metal ABC transporter permease isoform A


Gene families : OG_01_0000325 (OrthoFinder) Phylogenetic Tree(s): OG0000325_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000029.1_cds_PRW05775.1_6063
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Cre12.g561550 30791991 Solute transport.primary active transport.ABC... 0.02 OrthoFinder
Dusal.0100s00019.1 33202458 ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder
PTI_16G02670.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
TP19G00030.1 No alias ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder
XM_002502312.1 MICPUN_58287, 58287 ATP-binding cassette superfamily 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001671 ATPase activator activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Enrichment
MF GO:0004659 prenyltransferase activity IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Enrichment
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
MF GO:0008318 protein prenyltransferase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
BP GO:0018342 protein prenylation IEP Enrichment
CC GO:0030173 integral component of Golgi membrane IEP Enrichment
CC GO:0031228 intrinsic component of Golgi membrane IEP Enrichment
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Enrichment
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0097354 prenylation IEP Enrichment
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 92 340
IPR002893 Znf_MYND 1429 1459
IPR003439 ABC_transporter-like_ATP-bd 543 692
No external refs found!