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  5. lcl|LHPG02000029.1_cds_PRW05764.1_6071

lcl|LHPG02000029.1_cds_PRW05764.1_6071 (PRW05764)


Aliases : PRW05764

Description : Thioredoxin chloroplastic


Gene families : OG_01_0000156 (OrthoFinder) Phylogenetic Tree(s): OG0000156_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000029.1_cds_PRW05764.1_6071
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
OT_05G00960.1 No alias Thioredoxin domain [Interproscan]. 0.02 OrthoFinder
OT_05G02200.1 No alias Thioredoxin domain [Interproscan]. 0.03 OrthoFinder
Sro1979_g309060.1 Contig3652.g28201 Thioredoxin-like protein CITRX, chloroplastic 0.01 OrthoFinder
SymbC1.scaffold25.232 25.232 Lon, substrate-binding domain; Thioredoxin domain;... 0.02 OrthoFinder
Vocar.0004s0109.1 32889838 Thioredoxin domain [Interproscan]. 0.02 OrthoFinder
Vocar.0026s0003.1 32892430 Thioredoxin domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000431.1_cds_GFH11746.1_6223 HaLaN_07297, GFH11746 Thioredoxin domain-containing protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Enrichment
MF GO:0051920 peroxiredoxin activity IEP Enrichment
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1904949 ATPase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR001810 F-box_dom 174 219
IPR013766 Thioredoxin_domain 60 162
No external refs found!