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Aliases : PRW05865
Description : Cleavage and polyadenylation specificity factor subunit 3
Gene families : OG_01_0001543 (OrthoFinder) Phylogenetic Tree(s): OG0001543_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|LHPG02000028.1_cds_PRW05865.1_6044 | |
| Cluster | HCCA: Cluster_34 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| SymbC1.scaffold647.2 | 647.2 | Beta-Casp domain; Metallo-beta-lactamase [Interproscan]. | 0.02 | OrthoFinder | |
| Transcript_contig_57597 | 57597 | Beta-Casp domain; Pre-mRNA 3'-end-processing... | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| CC | GO:0000276 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) | IEP | Enrichment |
| MF | GO:0000295 | adenine nucleotide transmembrane transporter activity | IEP | Enrichment |
| CC | GO:0000786 | nucleosome | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0003849 | 3-deoxy-7-phosphoheptulonate synthase activity | IEP | Enrichment |
| MF | GO:0004451 | isocitrate lyase activity | IEP | Enrichment |
| MF | GO:0004611 | phosphoenolpyruvate carboxykinase activity | IEP | Enrichment |
| MF | GO:0004612 | phosphoenolpyruvate carboxykinase (ATP) activity | IEP | Enrichment |
| MF | GO:0004807 | triose-phosphate isomerase activity | IEP | Enrichment |
| MF | GO:0005346 | purine ribonucleotide transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0005347 | ATP transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0005471 | ATP:ADP antiporter activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| MF | GO:0005534 | galactose binding | IEP | Enrichment |
| CC | GO:0005681 | spliceosomal complex | IEP | Enrichment |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Enrichment |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | Enrichment |
| BP | GO:0006006 | glucose metabolic process | IEP | Enrichment |
| BP | GO:0006094 | gluconeogenesis | IEP | Enrichment |
| BP | GO:0006783 | heme biosynthetic process | IEP | Enrichment |
| BP | GO:0006784 | heme A biosynthetic process | IEP | Enrichment |
| BP | GO:0006810 | transport | IEP | Enrichment |
| BP | GO:0006811 | ion transport | IEP | Enrichment |
| BP | GO:0006812 | cation transport | IEP | Enrichment |
| BP | GO:0006862 | nucleotide transport | IEP | Enrichment |
| MF | GO:0008514 | organic anion transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Enrichment |
| BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Enrichment |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015215 | nucleotide transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015216 | purine nucleotide transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015217 | ADP transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015301 | anion:anion antiporter activity | IEP | Enrichment |
| MF | GO:0015605 | organophosphate ester transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0015748 | organophosphate ester transport | IEP | Enrichment |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Enrichment |
| MF | GO:0016829 | lyase activity | IEP | Enrichment |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | Enrichment |
| MF | GO:0016831 | carboxy-lyase activity | IEP | Enrichment |
| MF | GO:0016833 | oxo-acid-lyase activity | IEP | Enrichment |
| MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Enrichment |
| MF | GO:0016977 | chitosanase activity | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| BP | GO:0019318 | hexose metabolic process | IEP | Enrichment |
| BP | GO:0019319 | hexose biosynthetic process | IEP | Enrichment |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Enrichment |
| CC | GO:0030117 | membrane coat | IEP | Enrichment |
| CC | GO:0030120 | vesicle coat | IEP | Enrichment |
| CC | GO:0030126 | COPI vesicle coat | IEP | Enrichment |
| CC | GO:0030127 | COPII vesicle coat | IEP | Enrichment |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
| CC | GO:0032993 | protein-DNA complex | IEP | Enrichment |
| CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | Enrichment |
| CC | GO:0033179 | proton-transporting V-type ATPase, V0 domain | IEP | Enrichment |
| BP | GO:0034220 | ion transmembrane transport | IEP | Enrichment |
| MF | GO:0035299 | inositol pentakisphosphate 2-kinase activity | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| BP | GO:0042168 | heme metabolic process | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| BP | GO:0044281 | small molecule metabolic process | IEP | Enrichment |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Enrichment |
| CC | GO:0044815 | DNA packaging complex | IEP | Enrichment |
| CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | Enrichment |
| BP | GO:0046034 | ATP metabolic process | IEP | Enrichment |
| BP | GO:0046148 | pigment biosynthetic process | IEP | Enrichment |
| BP | GO:0046160 | heme a metabolic process | IEP | Enrichment |
| BP | GO:0046364 | monosaccharide biosynthetic process | IEP | Enrichment |
| MF | GO:0048029 | monosaccharide binding | IEP | Enrichment |
| BP | GO:0051179 | localization | IEP | Enrichment |
| BP | GO:0051234 | establishment of localization | IEP | Enrichment |
| MF | GO:0070279 | vitamin B6 binding | IEP | Enrichment |
| BP | GO:0071702 | organic substance transport | IEP | Enrichment |
| BP | GO:0071705 | nitrogen compound transport | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| BP | GO:0098655 | cation transmembrane transport | IEP | Enrichment |
| BP | GO:0098660 | inorganic ion transmembrane transport | IEP | Enrichment |
| BP | GO:0098662 | inorganic cation transmembrane transport | IEP | Enrichment |
| CC | GO:0098796 | membrane protein complex | IEP | Enrichment |
| MF | GO:0140323 | solute:anion antiporter activity | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| BP | GO:1902600 | proton transmembrane transport | IEP | Enrichment |
| No external refs found! |