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  5. Cpa|evm.model.tig00000615.26

Cpa|evm.model.tig00000615.26 (tig00000615_g2555.t1)


Aliases : tig00000615_g2555.t1

Description : ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana


Gene families : OG_01_0000107 (OrthoFinder) Phylogenetic Tree(s): OG0000107_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000615.26
Cluster HCCA: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
EOD31600 No alias Helicase, C-terminal; ATP-dependent DNA helicase RecQ,... 0.01 OrthoFinder
PTI_02G04790.1 No alias Zinc finger, GRF-type; Helicase, C-terminal;... 0.02 OrthoFinder
Vocar.0025s0103.1 32898387 RQC domain; DEAD/DEAH box helicase domain; Helicase,... 0.02 OrthoFinder
lcl|BLLF01000272.1_cds_GFH09887.1_4364 HaLaN_05112, GFH09887 Hypothetical protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR001650 Helicase_C 278 362
IPR011545 DEAD/DEAH_box_helicase_dom 37 211
IPR032284 RecQ_Zn-bd 376 444
No external refs found!