lcl|LHPG02000028.1_cds_PRW05842.1_6009 (PRW05842)


Aliases : PRW05842

Description : Ultraviolet-B receptor UVR8


Gene families : OG_01_0000020 (OrthoFinder) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000028.1_cds_PRW05842.1_6009
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021428.3 tig00021428_g21144.t1 No description available 0.02 OrthoFinder
Cre17.g742200 30782802 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cz09g20160.t1 No alias Regulator of chromosome condensation, RCC1 [Interproscan]. 0.03 OrthoFinder
EOD23616 No alias Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
Sro188_g081280.2 No alias Regulator of chromosome condensation, RCC1; Regulator of... 0.02 OrthoFinder
XM_002501055.1 MICPUN_67407, 67407 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000610.1_cds_GFH13424.1_7901 HaLaN_09308, GFH13424 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0000152 nuclear ubiquitin ligase complex IEP Enrichment
CC GO:0000808 origin recognition complex IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
CC GO:0005680 anaphase-promoting complex IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006487 protein N-linked glycosylation IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0007346 regulation of mitotic cell cycle IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
CC GO:0008250 oligosaccharyltransferase complex IEP Enrichment
BP GO:0010498 proteasomal protein catabolic process IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010965 regulation of mitotic sister chromatid separation IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
BP GO:0031145 anaphase-promoting complex-dependent catabolic process IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
BP GO:0033044 regulation of chromosome organization IEP Enrichment
BP GO:0033045 regulation of sister chromatid segregation IEP Enrichment
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0051983 regulation of chromosome segregation IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Enrichment
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
BP GO:1905818 regulation of chromosome separation IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 130 179
IPR000408 Reg_chr_condens 279 327
IPR000408 Reg_chr_condens 384 436
IPR000408 Reg_chr_condens 68 107
IPR000408 Reg_chr_condens 183 229
IPR000408 Reg_chr_condens 330 381
No external refs found!