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  5. lcl|LHPG02000028.1_cds_PRW05840.1_5994

lcl|LHPG02000028.1_cds_PRW05840.1_5994 (PRW05840)


Aliases : PRW05840

Description : NodB homology domain [Interproscan].


Gene families : OG_01_0001088 (OrthoFinder) Phylogenetic Tree(s): OG0001088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000028.1_cds_PRW05840.1_5994
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_53976 53976 NodB homology domain [Interproscan]. 0.04 OrthoFinder
Transcript_contig_54039 54039 NodB homology domain [Interproscan]. 0.03 OrthoFinder
Transcript_contig_57512 57512 NodB homology domain [Interproscan]. 0.03 OrthoFinder
Transcript_contig_57626 57626 NodB homology domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_61498 61498 Hypothetical protein 0.03 OrthoFinder
Transcript_contig_6753 6753 Hypothetical protein 0.02 OrthoFinder
Transcript_contig_78124 78124 NodB homology domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_78131 78131 NodB homology domain [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61361.1_387 PRW61361 Left border a 0.05 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006475 internal protein amino acid acetylation IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016573 histone acetylation IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018393 internal peptidyl-lysine acetylation IEP Enrichment
BP GO:0018394 peptidyl-lysine acetylation IEP Enrichment
CC GO:0031248 protein acetyltransferase complex IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
BP GO:0071569 protein ufmylation IEP Enrichment
CC GO:1902493 acetyltransferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR002509 NODB_dom 673 762
IPR002509 NODB_dom 91 181
IPR002509 NODB_dom 382 471
No external refs found!