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  5. lcl|LHPG02000026.1_cds_PRW18370.1_5873

lcl|LHPG02000026.1_cds_PRW18370.1_5873 (PRW18370)


Aliases : PRW18370

Description : DNA polymerase alpha subunit B


Gene families : OG_01_0003987 (OrthoFinder) Phylogenetic Tree(s): OG0003987_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000026.1_cds_PRW18370.1_5873
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001107.10 tig00001107_g7095.t1 Cell cycle.interphase.DNA replication.elongation.DNA... 0.07 OrthoFinder
Cre01.g017450 30788627 Cell cycle.interphase.DNA replication.elongation.DNA... 0.06 OrthoFinder
Cz10g02170.t1 No alias DNA polymerase alpha/delta/epsilon, subunit B [Interproscan]. 0.05 OrthoFinder
EOD03966 No alias Putative DNA polymerase alpha subunit two [Ensembl]. 0.04 OrthoFinder
OT_11G01450.1 No alias DNA polymerase alpha/delta/epsilon, subunit B [Interproscan]. 0.03 OrthoFinder
PTI_07G03160.1 No alias DNA polymerase alpha/delta/epsilon, subunit B; DNA... 0.06 OrthoFinder
Sro92_g047960.1 Contig486.g6556 Polymerase alpha subunit B 0.04 OrthoFinder
TP03G07290.1 No alias DNA polymerase alpha/delta/epsilon, subunit B; DNA... 0.01 OrthoFinder
Transcript_contig_54009 54009 DNA polymerase alpha/delta/epsilon, subunit B [Interproscan]. 0.05 OrthoFinder
XM_002509070.1 MICPUN_62930, 62930 DNA polymerase 0.04 OrthoFinder
XM_003061598.1 MicpuC2_20702, 20702 DNA polymerase alpha/delta/epsilon, subunit B [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8496167.1_2165 KAA8496167 DNA polymerase alpha subunit B 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Enrichment
CC GO:0000444 MIS12/MIND type complex IEP Enrichment
CC GO:0000775 chromosome, centromeric region IEP Enrichment
CC GO:0000776 kinetochore IEP Enrichment
CC GO:0000818 nuclear MIS12/MIND complex IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0004146 dihydrofolate reductase activity IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0007051 spindle organization IEP Enrichment
BP GO:0007059 chromosome segregation IEP Enrichment
BP GO:0007062 sister chromatid cohesion IEP Enrichment
BP GO:0007064 mitotic sister chromatid cohesion IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0008156 negative regulation of DNA replication IEP Enrichment
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Enrichment
BP GO:0009890 negative regulation of biosynthetic process IEP Enrichment
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0022414 reproductive process IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
BP GO:0031324 negative regulation of cellular metabolic process IEP Enrichment
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Enrichment
CC GO:0031390 Ctf18 RFC-like complex IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
BP GO:0045005 DNA-dependent DNA replication maintenance of fidelity IEP Enrichment
BP GO:0045132 meiotic chromosome segregation IEP Enrichment
BP GO:0046653 tetrahydrofolate metabolic process IEP Enrichment
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Enrichment
BP GO:0048478 replication fork protection IEP Enrichment
BP GO:0051225 spindle assembly IEP Enrichment
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP Enrichment
CC GO:0070652 HAUS complex IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
BP GO:0090329 regulation of DNA-dependent DNA replication IEP Enrichment
CC GO:0098687 chromosomal region IEP Enrichment
BP GO:0098813 nuclear chromosome segregation IEP Enrichment
CC GO:0099080 supramolecular complex IEP Enrichment
BP GO:1903046 meiotic cell cycle process IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
BP GO:2000104 negative regulation of DNA-dependent DNA replication IEP Enrichment
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR007185 DNA_pol_a/d/e_bsu 345 558
No external refs found!