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  5. lcl|LHPG02000026.1_cds_PRW18338.1_5788

lcl|LHPG02000026.1_cds_PRW18338.1_5788 (PRW18338)


Aliases : PRW18338

Description : 30S ribosomal chloroplastic-like


Gene families : OG_01_0001358 (OrthoFinder) Phylogenetic Tree(s): OG0001358_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000026.1_cds_PRW18338.1_5788
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001307.5 tig00001307_g8120.t1 No description available 0.03 OrthoFinder
Sro174_g076510.1 Contig4298.g32435 Protein S17 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
CC GO:0030008 TRAPP complex IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0034227 tRNA thio-modification IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0045048 protein insertion into ER membrane IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051205 protein insertion into membrane IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0071816 tail-anchored membrane protein insertion into ER membrane IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
InterPro domains Description Start Stop
IPR000266 Ribosomal_S17/S11 7 73
No external refs found!