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  5. Cpa|evm.model.tig00000607.5

Cpa|evm.model.tig00000607.5 (tig00000097_g3995.t1)


Aliases : tig00000097_g3995.t1

Description : RNA-directed DNA polymerase homolog OS=Oenothera berteroana


Gene families : OG_01_0000258 (OrthoFinder) Phylogenetic Tree(s): OG0000258_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000607.5
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000097.3 tig00000097_g3995.t1 RNA-directed DNA polymerase homolog OS=Oenothera berteroana 0.03 OrthoFinder
Cpa|evm.model.tig00000444.2 tig00021332_g20320.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00000444.3 tig00000444_g793.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00000489.22 tig00000607_g2516.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00000489.23 tig00000381_g24536.t1 No description available 0.06 OrthoFinder
Cpa|evm.model.tig00000581.1 tig00000581_g2212.t1 No description available 0.06 OrthoFinder
Cpa|evm.model.tig00000581.2 tig00001052_g6619.t1 No description available 0.05 OrthoFinder
Cpa|evm.model.tig00020531.10 tig00020531_g10039.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00020746.23 tig00000381_g24542.t1 No description available 0.06 OrthoFinder
Cpa|evm.model.tig00020770.6 tig00021319_g20263.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00020770.7 tig00021319_g20263.t1 No description available 0.09 OrthoFinder
Cpa|evm.model.tig00021319.71 tig00021319_g20263.t1 No description available 0.05 OrthoFinder
Cpa|evm.model.tig00021326.26 tig00000381_g24536.t1 RNA-directed DNA polymerase homolog OS=Oenothera berteroana 0.04 OrthoFinder
Cpa|evm.model.tig00021326.29 tig00021326_g20295.t2 No description available 0.07 OrthoFinder
Cpa|evm.model.tig00021332.4 tig00021319_g20263.t1 No description available 0.05 OrthoFinder
Cpa|evm.model.tig00021357.84 tig00000607_g2516.t1 RNA-directed DNA polymerase homolog OS=Oenothera berteroana 0.04 OrthoFinder
Cpa|evm.model.tig00021358.4 tig00021319_g20263.t1 RNA-directed DNA polymerase homolog OS=Oenothera berteroana 0.05 OrthoFinder
Cpa|evm.model.tig00021373.1 tig00000042_g15521.t1 No description available 0.07 OrthoFinder
Cpa|evm.model.tig00021518.13 tig00021518_g22031.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00021746.4 tig00021319_g20263.t1 No description available 0.07 OrthoFinder
Cpa|evm.model.tig00021746.5 tig00001052_g6619.t1 No description available 0.05 OrthoFinder
Cpa|evm.model.tig00021746.8 tig00021746_g23390.t1 No description available 0.06 OrthoFinder
Cpa|evm.model.tig00022104.14 tig00022104_g23830.t1 No description available 0.07 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0009916 alternative oxidase activity IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Enrichment
InterPro domains Description Start Stop
IPR000477 RT_dom 190 349
IPR041577 RT_RNaseH_2 419 520
No external refs found!