lcl|LHPG02000025.1_cds_PRW20288.1_5661 (PRW20288)


Aliases : PRW20288

Description : Pre-rRNA-processing esf-2


Gene families : OG_01_0003780 (OrthoFinder) Phylogenetic Tree(s): OG0003780_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000025.1_cds_PRW20288.1_5661
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
TP14G01440.1 No alias Peptidase S24/S26A/S26B/S26C [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499644.1_8597 KAA8499644 Signal peptidase complex catalytic subunit SEC11 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0004366 glycerol-3-phosphate O-acyltransferase activity IEP Enrichment
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008374 O-acyltransferase activity IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Enrichment
MF GO:0015109 chromate transmembrane transporter activity IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
BP GO:0015703 chromate transport IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016849 phosphorus-oxygen lyase activity IEP Enrichment
BP GO:0019321 pentose metabolic process IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
BP GO:0019566 arabinose metabolic process IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0046373 L-arabinose metabolic process IEP Enrichment
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
MF GO:0052855 ADP-dependent NAD(P)H-hydrate dehydratase activity IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 212 292
IPR015927 Peptidase_S24_S26A/B/C 49 100
No external refs found!