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  5. lcl|LHPG02000024.1_cds_PRW20404.1_5602

lcl|LHPG02000024.1_cds_PRW20404.1_5602 (PRW20404)


Aliases : PRW20404

Description : Myb-related B isoform A


Gene families : OG_01_0000018 (OrthoFinder) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000024.1_cds_PRW20404.1_5602
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Cre02.g111200 30786020 No description available 0.02 OrthoFinder
Cz14g00040.t1 No alias SANT/Myb domain [Interproscan]. 0.02 OrthoFinder
EOD11048 No alias Myb-like DNA-binding domain [Interproscan]. 0.02 OrthoFinder
EOD17696 No alias Myb-like DNA-binding domain [Interproscan]. 0.02 OrthoFinder
EOD35386 No alias Myb-like DNA-binding domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_57499 57499 SANT/Myb domain [Interproscan]. 0.03 OrthoFinder
Vocar.0001s1620.1 32884611 SANT/Myb domain [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8496233.1_2231 KAA8496233 Transcription factor MYB3R-5 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043044 ATP-dependent chromatin remodeling IEP Enrichment
BP GO:0043486 histone exchange IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
InterPro domains Description Start Stop
IPR001005 SANT/Myb 58 98
IPR001005 SANT/Myb 6 48
No external refs found!