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  5. lcl|LHPG02000024.1_cds_PRW20403.1_5601

lcl|LHPG02000024.1_cds_PRW20403.1_5601 (PRW20403)


Aliases : PRW20403

Description : Myb-related B isoform B


Gene families : OG_01_0000018 (OrthoFinder) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000024.1_cds_PRW20403.1_5601
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Sro341_g121580.1 Contig3952.g30290 Myb-related protein A 0.03 OrthoFinder
lcl|BLLF01000133.1_cds_GFH08051.1_2528 HaLaN_02951, GFH08051 SANT/Myb domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000902.1_cds_GFH15798.1_10275 HaLaN_12098, GFH15798 Myb-like DNA-binding domain [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499203.1_8156 KAA8499203 Transcriptional activator Myb 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0051260 protein homooligomerization IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001005 SANT/Myb 6 48
IPR001005 SANT/Myb 58 98
No external refs found!