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  5. lcl|LHPG02000024.1_cds_PRW20359.1_5525

lcl|LHPG02000024.1_cds_PRW20359.1_5525 (PRW20359)


Aliases : PRW20359

Description : Centrin


Gene families : OG_01_0000037 (OrthoFinder) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000024.1_cds_PRW20359.1_5525
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000944.15 tig00000944_g5936.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00001388.4 tig00001388_g8574.t1 Caltractin OS=Scherffelia dubia 0.03 OrthoFinder
Cpa|evm.model.tig00021720.13 tig00021720_g23183.t1 RNA processing.messenger ribonucleoprotein particle... 0.03 OrthoFinder
Cre03.g150300 30787530 Calmodulin-3 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder
Cz14g12250.t1 No alias EF-hand domain pair; EF-hand domain [Interproscan]. 0.03 OrthoFinder
Cz16g19120.t1 No alias EF-hand domain [Interproscan]. 0.03 OrthoFinder
Dusal.0080s00002.1 33203946 EF-hand domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP Enrichment
BP GO:0000723 telomere maintenance IEP Enrichment
CC GO:0000775 chromosome, centromeric region IEP Enrichment
MF GO:0003856 3-dehydroquinate synthase activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004725 protein tyrosine phosphatase activity IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0007049 cell cycle IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
MF GO:0038024 cargo receptor activity IEP Enrichment
MF GO:0042393 histone binding IEP Enrichment
MF GO:0045735 nutrient reservoir activity IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
MF GO:0097020 COPII receptor activity IEP Enrichment
CC GO:0098687 chromosomal region IEP Enrichment
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 35 97
No external refs found!