lcl|LHPG02000024.1_cds_PRW20331.1_5603 (PRW20331)

Aliases : PRW20331

Description : Pumilio-like protein isoform A

Gene families : OG_01_0000430 (OrthoFinder) Phylogenetic Tree(s): OG0000430_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|LHPG02000024.1_cds_PRW20331.1_5603
Cluster	HCCA: Cluster_34

Target	Alias	Description	ECC score	Gene Family Method	Actions
Transcript_contig_57194	57194	Pumilio RNA-binding repeat [Interproscan].	0.03	OrthoFinder
lcl\|LHPG02000024.1_cds_PRW20332.1_5604	PRW20332	Pumilio-like protein isoform B	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008146	sulfotransferase activity	IEA	Interproscan
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016782	transferase activity, transferring sulphur-containing groups	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000723	telomere maintenance	IEP	Enrichment
MF	GO:0003678	DNA helicase activity	IEP	Enrichment
MF	GO:0004017	adenylate kinase activity	IEP	Enrichment
MF	GO:0004252	serine-type endopeptidase activity	IEP	Enrichment
CC	GO:0005576	extracellular region	IEP	Enrichment
MF	GO:0008236	serine-type peptidase activity	IEP	Enrichment
MF	GO:0016746	acyltransferase activity	IEP	Enrichment
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	Enrichment
MF	GO:0016776	phosphotransferase activity, phosphate group as acceptor	IEP	Enrichment
MF	GO:0016977	chitosanase activity	IEP	Enrichment
MF	GO:0017171	serine hydrolase activity	IEP	Enrichment
MF	GO:0019205	nucleobase-containing compound kinase activity	IEP	Enrichment
BP	GO:0032200	telomere organization	IEP	Enrichment
MF	GO:0035299	inositol pentakisphosphate 2-kinase activity	IEP	Enrichment
MF	GO:0042393	histone binding	IEP	Enrichment
BP	GO:0042592	homeostatic process	IEP	Enrichment
MF	GO:0046912	acyltransferase, acyl groups converted into alkyl on transfer	IEP	Enrichment
MF	GO:0050145	nucleoside monophosphate kinase activity	IEP	Enrichment
BP	GO:0060249	anatomical structure homeostasis	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR005331	Sulfotransferase	867	945
IPR001313	Pumilio_RNA-bd_rpt	528	548
IPR001313	Pumilio_RNA-bd_rpt	456	480
IPR001313	Pumilio_RNA-bd_rpt	567	592
IPR001313	Pumilio_RNA-bd_rpt	682	707
IPR001313	Pumilio_RNA-bd_rpt	489	513
IPR001313	Pumilio_RNA-bd_rpt	604	631

External Links

No external refs found!