lcl|LHPG02000023.1_cds_PRW20503.1_5432 (PRW20503)

Aliases : PRW20503

Description : Squamosa promoter-binding 16

Gene families : OG_01_0000101 (OrthoFinder) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|LHPG02000023.1_cds_PRW20503.1_5432
Cluster	HCCA: Cluster_57

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cre07.g345050	30775147	RNA biosynthesis.transcriptional activation.SBP...	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0018995	host cellular component	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Enrichment
MF	GO:0003854	3-beta-hydroxy-delta5-steroid dehydrogenase activity	IEP	Enrichment
MF	GO:0004175	endopeptidase activity	IEP	Enrichment
MF	GO:0004197	cysteine-type endopeptidase activity	IEP	Enrichment
MF	GO:0005319	lipid transporter activity	IEP	Enrichment
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Enrichment
BP	GO:0006694	steroid biosynthetic process	IEP	Enrichment
BP	GO:0006835	dicarboxylic acid transport	IEP	Enrichment
BP	GO:0006869	lipid transport	IEP	Enrichment
BP	GO:0008202	steroid metabolic process	IEP	Enrichment
MF	GO:0008963	phospho-N-acetylmuramoyl-pentapeptide-transferase activity	IEP	Enrichment
BP	GO:0015740	C4-dicarboxylate transport	IEP	Enrichment
BP	GO:0015743	malate transport	IEP	Enrichment
MF	GO:0016229	steroid dehydrogenase activity	IEP	Enrichment
CC	GO:0016592	mediator complex	IEP	Enrichment
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	IEP	Enrichment
MF	GO:0016859	cis-trans isomerase activity	IEP	Enrichment
MF	GO:0033764	steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Enrichment
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Enrichment
MF	GO:0070403	NAD+ binding	IEP	Enrichment
BP	GO:0071586	CAAX-box protein processing	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR004333	SBP_dom	83	154

External Links

No external refs found!