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  5. Cpa|evm.model.tig00000605.24

Cpa|evm.model.tig00000605.24 (tig00000605_g2490.t1)


Aliases : tig00000605_g2490.t1

No description available


Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000605.24
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000042.236 tig00000042_g15634.t1 Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.03 OrthoFinder
Cpa|evm.model.tig00000042.59 tig00000254_g22474.t1 Ethylene receptor 1 OS=Brassica oleracea 0.04 OrthoFinder
Cpa|evm.model.tig00000158.93 tig00000158_g10200.t1 Probable histidine kinase 5 OS=Oryza sativa subsp. japonica 0.04 OrthoFinder
Cpa|evm.model.tig00000190.40 tig00000190_g13861.t1 Ethylene receptor OS=Nicotiana tabacum 0.03 OrthoFinder
Cpa|evm.model.tig00000254.26 tig00000254_g22474.t1 Ethylene receptor 1 OS=Brassica oleracea 0.05 OrthoFinder
Cpa|evm.model.tig00001224.9 tig00001224_g7632.t1 Histidine kinase 5 OS=Arabidopsis thaliana 0.04 OrthoFinder
Cpa|evm.model.tig00001331.12 tig00001331_g8175.t1 Histidine kinase 2 OS=Arabidopsis thaliana 0.04 OrthoFinder
Cpa|evm.model.tig00020660.25 tig00021501_g21945.t1 Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.02 OrthoFinder
Cpa|evm.model.tig00020903.6 tig00020903_g15073.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00020943.57 tig00020943_g16300.t1 Ethylene receptor OS=Malus domestica 0.04 OrthoFinder
Cpa|evm.model.tig00020964.8 tig00020964_g16779.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00020999.10 tig00000743_g3872.t2 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00021464.23 tig00021464_g21729.t1 Histidine kinase 3 OS=Arabidopsis thaliana 0.04 OrthoFinder
Sro1939_g306550.1 Contig1997.g17090 Hybrid signal transduction histidine kinase J 0.01 OrthoFinder
lcl|BLLF01000561.1_cds_GFH12981.1_7458 HaLaN_08775, GFH12981 Signal transduction histidine kinase,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR003594 HATPase_C 461 529
IPR025847 MEDS_domain 42 187
IPR001789 Sig_transdc_resp-reg_receiver 675 722
IPR003661 HisK_dim/P 326 389
No external refs found!