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  5. lcl|LHPG02000022.1_cds_PRW20682.1_5260

lcl|LHPG02000022.1_cds_PRW20682.1_5260 (PRW20682)


Aliases : PRW20682

Description : 60S ribosomal L10-3


Gene families : OG_01_0002492 (OrthoFinder) Phylogenetic Tree(s): OG0002492_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000022.1_cds_PRW20682.1_5260
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001424.5 tig00001424_g8704.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.15 OrthoFinder
Cz05g34280.t1 No alias Ribosomal protein L10e/L16 [Interproscan]. 0.08 OrthoFinder
Dusal.0318s00002.1 33185638 Ribosomal protein L10e/L16 [Interproscan]. 0.26 OrthoFinder
EOD11710 No alias Ribosomal protein L10e/L16 [Interproscan]. 0.05 OrthoFinder
OT_03G04340.1 No alias Ribosomal protein L10e/L16 [Interproscan]. 0.09 OrthoFinder
PTI_18G02960.1 No alias Ribosomal protein L10e/L16 [Interproscan]. 0.09 OrthoFinder
Transcript_contig_89977 89977 Ribosomal protein L10e/L16 [Interproscan]. 0.03 OrthoFinder
XM_002507165.1 MICPUN_93045, 93045 Ribosomal protein L10e/L16 [Interproscan]. 0.19 OrthoFinder
XM_003054845.1 MicpuC2_24102, 24102 Ribosomal protein L10e/L16 [Interproscan]. 0.07 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006788 heme oxidation IEP Enrichment
MF GO:0016872 intramolecular lyase activity IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
InterPro domains Description Start Stop
IPR016180 Ribosomal_L10e/L16 13 166
No external refs found!