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  5. lcl|LHPG02000022.1_cds_PRW20600.1_5221

lcl|LHPG02000022.1_cds_PRW20600.1_5221 (PRW20600)


Aliases : PRW20600

Description : 40S ribosomal S29


Gene families : OG_01_0005334 (OrthoFinder) Phylogenetic Tree(s): OG0005334_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000022.1_cds_PRW20600.1_5221
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Cre08.g358556 30773441, RPS29 Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder
Dusal.0849s00001.1 33190877 Ribosomal protein S14 [Interproscan]. 0.02 OrthoFinder
PTI_11G01030.1 No alias Ribosomal protein S14 [Interproscan]. 0.07 OrthoFinder
Sro196_g083500.1 Contig3206.g25346 40S ribosomal protein S29 0.01 OrthoFinder
TP14G00880.1 No alias Ribosomal protein S14 [Interproscan]. 0.02 OrthoFinder
Vocar.0021s0188.1 32895920 Ribosomal protein S14 [Interproscan]. 0.02 OrthoFinder
XM_002503251.1 MICPUN_91099, 91099 Ribosomal protein S14 [Interproscan]. 0.04 OrthoFinder
XM_003058391.1 MicpuC2_33459, 33459 Ribosomal protein S14 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0051260 protein homooligomerization IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
InterPro domains Description Start Stop
IPR001209 Ribosomal_S14 7 56
No external refs found!